Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAM1L1Q8N609 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 MIR1909-201ENST00000411312 80 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 CD8B2-202ENST00000417670 633 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 POM121L8P-201ENST00000417732 1281 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 POM121L9P-203ENST00000441984 1285 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 CTBP2P5-201ENST00000454986 1264 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 AC104989.1-201ENST00000519711 778 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 IGHV3-71-201ENST00000523324 359 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 AC017083.2-201ENST00000608069 979 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 RHOXF1P1-202ENST00000635473 501 ntBASIC15□□□□□ -0.01
TRAM1L1Q8N609 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAM1L1Q8N609 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
TRAM1L1Q8N609 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 AC022210.1-201ENST00000449856 793 ntBASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 FO681548.1-201ENST00000455617 1132 ntBASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAM1L1Q8N609 AC078819.1-201ENST00000547454 765 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms