Protein–RNA interactions for Protein: Q8N4B4

FBXO39, F-box only protein 39, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39Q8N4B4 ZBED1P1-201ENST00000502364 1930 ntBASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AC104989.1-201ENST00000519711 778 ntBASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AC010319.3-201ENST00000597028 470 ntBASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 MROH4P-201ENST00000431302 1578 ntBASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FBXO39Q8N4B4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC074338.1-201ENST00000416825 156 ntBASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 RN7SL399P-201ENST00000471648 279 ntBASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC036164.1-201ENST00000570544 333 ntBASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 BTNL10-201ENST00000595971 695 ntBASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
FBXO39Q8N4B4 AC106881.1-201ENST00000605849 3329 ntBASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 CICP23-201ENST00000605013 2741 ntBASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 AC013726.1-201ENST00000563747 2285 ntBASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
FBXO39Q8N4B4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FBXO39Q8N4B4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
FBXO39Q8N4B4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
FBXO39Q8N4B4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms