Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VPS52Q8N1B4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AL138799.1-201ENST00000448213 1675 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC006001.1-201ENST00000325130 474 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 MIR326-201ENST00000362220 95 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 GPAA1P2-201ENST00000417923 928 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC078819.1-201ENST00000547454 765 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC012085.1-201ENST00000548270 765 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC138951.2-201ENST00000623455 1161 ntBASIC16.57■□□□□ 0.24
VPS52Q8N1B4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VPS52Q8N1B4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 FAM86HP-204ENST00000513466 959 ntBASIC16.56■□□□□ 0.24
VPS52Q8N1B4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 MIR4313-201ENST00000580760 101 ntBASIC16.56■□□□□ 0.24
VPS52Q8N1B4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 AL118558.3-201ENST00000607414 1079 ntBASIC16.56■□□□□ 0.24
VPS52Q8N1B4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VPS52Q8N1B4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VPS52Q8N1B4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms