Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COL27A1Q8IZC6 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 SSR4P1-203ENST00000599569 2260 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC141586.1-203ENST00000567242 366 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC093752.3-201ENST00000567343 901 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 LINC01815-202ENST00000641468 1409 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 LYPLA2P1-203ENST00000447689 696 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AL035414.1-201ENST00000451327 857 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 LINC01783-202ENST00000614408 828 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 BX284668.2-205ENST00000619677 828 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 AL132780.4-201ENST00000624870 1135 ntBASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COL27A1Q8IZC6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 MARK2P16-201ENST00000605714 1723 ntBASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 AC103810.10-201ENST00000606504 343 ntBASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 AC009560.1-201ENST00000620208 434 ntBASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COL27A1Q8IZC6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms