Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 TMEM14DP-201ENST00000422205 345 ntBASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 AC022137.2-201ENST00000503482 481 ntBASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 PTP4A1P2-201ENST00000546033 454 ntBASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 AC017083.2-201ENST00000608069 979 ntBASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
SCUBE3Q8IX30 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 LILRP1-201ENST00000444199 1370 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 GIMAP3P-201ENST00000495150 836 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 KRT18P25-201ENST00000508931 1278 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 SLC25A47P1-201ENST00000531577 414 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC008735.3-201ENST00000596646 500 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 AC084346.2-201ENST00000607097 949 ntBASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SCUBE3Q8IX30 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 KRT8P14-201ENST00000414254 1442 ntBASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCUBE3Q8IX30 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 AJ011931.1-201ENST00000618749 2492 ntBASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 RPS2P32-201ENST00000439199 892 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms