Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CCDC60Q8IWA6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 BTBD6P1-201ENST00000412176 1267 ntBASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 FKBP4P6-201ENST00000457486 1332 ntBASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ZNF767P-206ENST00000513792 565 ntBASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 WASH3P-207ENST00000560956 1394 ntBASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ZACNP1-201ENST00000612259 710 ntBASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 AL096828.3-201ENST00000615354 462 ntBASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC60Q8IWA6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 AC023090.2-201ENST00000625182 2110 ntBASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 AP000593.2-201ENST00000542775 1433 ntBASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CHMP1AP1-201ENST00000445563 662 ntBASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 HIST2H2BB-201ENST00000449108 381 ntBASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 AC009093.2-202ENST00000620513 2079 ntBASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC60Q8IWA6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 AC011840.2-201ENST00000563063 1520 ntBASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 RN7SKP175-201ENST00000408472 289 ntBASIC16.81■□□□□ 0.28
CCDC60Q8IWA6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms