Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CDKL3Q8IVW4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 AL138799.1-201ENST00000448213 1675 ntBASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 SPDYE19P-201ENST00000338590 713 ntBASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 AL645937.2-201ENST00000396808 931 ntBASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 RRP7BP-205ENST00000566851 833 ntBASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.67■□□□□ 0.1
CDKL3Q8IVW4 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AC018442.1-201ENST00000421439 2061 ntBASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AL157414.3-201ENST00000624276 1954 ntBASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AL158070.2-201ENST00000623713 1621 ntBASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.66■□□□□ 0.1
CDKL3Q8IVW4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms