Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSMD2Q8IV50 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AC090505.1-201ENST00000430515 1834 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AC092474.2-201ENST00000424288 719 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AL513480.1-201ENST00000451731 511 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AF238378.1-201ENST00000526806 358 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AL356488.2-201ENST00000602755 427 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AL121772.3-201ENST00000610840 674 ntBASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSMD2Q8IV50 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AC108073.2-201ENST00000464002 357 ntBASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 CLEC4GP1-201ENST00000596555 870 ntBASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AL078644.1-201ENST00000609881 752 ntBASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 MIR1199-201ENST00000621445 119 ntBASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSMD2Q8IV50 AP002761.4-201ENST00000565433 3361 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms