Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC016700.1-201ENST00000429424 312 ntBASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AL590640.2-201ENST00000457038 527 ntBASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC134698.3-201ENST00000523880 214 ntBASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 MIR3907-201ENST00000579424 151 ntBASIC16.19■□□□□ 0.18
RNF135Q8IUD6 MIR4750-201ENST00000584564 56 ntBASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNF135Q8IUD6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 AL138709.1-201ENST00000614840 1693 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 AL355334.1-201ENST00000417713 215 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 SPTLC1P5-201ENST00000450718 252 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 KRT18P25-201ENST00000508931 1278 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 FGFR3P5-201ENST00000564496 886 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 AC132872.1-201ENST00000566986 1195 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 AC138649.2-201ENST00000615886 705 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF135Q8IUD6 DBET-201ENST00000630918 3363 ntBASIC16.18■□□□□ 0.18
RNF135Q8IUD6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms