Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 AC234644.1-201ENST00000406065 370 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC018463.1-201ENST00000456674 917 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 AL161773.1-201ENST00000624845 863 ntBASIC15.29■□□□□ 0.04
DENND4AQ7Z401 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
DENND4AQ7Z401 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 MIR1227-201ENST00000408484 88 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AL807761.2-201ENST00000422849 729 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 TSPY25P-201ENST00000429463 745 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AC026320.2-201ENST00000434379 478 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 RPSAP15-201ENST00000448168 861 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AC127024.7-201ENST00000625101 200 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
DENND4AQ7Z401 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.28■□□□□ 0.04
DENND4AQ7Z401 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 AC020658.6-201ENST00000623564 1870 ntBASIC15.27■□□□□ 0.04
DENND4AQ7Z401 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 LILRP1-201ENST00000444199 1370 ntBASIC15.27■□□□□ 0.04
DENND4AQ7Z401 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DENND4AQ7Z401 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 NUDT4P2-201ENST00000578341 546 ntBASIC15.27■□□□□ 0.03
DENND4AQ7Z401 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 AC009084.3-201ENST00000623356 437 ntBASIC15.27■□□□□ 0.03
DENND4AQ7Z401 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
DENND4AQ7Z401 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 AP000845.1-201ENST00000581677 2131 ntBASIC15.26■□□□□ 0.03
DENND4AQ7Z401 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 AC007950.2-201ENST00000615045 2347 ntBASIC15.26■□□□□ 0.03
DENND4AQ7Z401 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.26■□□□□ 0.03
DENND4AQ7Z401 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms