Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AL583805.1-201ENST00000391389 531 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 HNRNPA1P27-201ENST00000412087 955 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AC008723.1-201ENST00000506922 207 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AL031713.1-201ENST00000564813 661 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 MIR6842-201ENST00000612539 65 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 PCDHGB8P-201ENST00000502926 1973 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 AHCYP4-201ENST00000419201 1315 ntBASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CCDC141Q6ZP82 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 RPS9P1-201ENST00000419943 583 ntBASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 AC003686.1-201ENST00000550956 1034 ntBASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 AL022334.2-201ENST00000610000 484 ntBASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 DOC2GP-204ENST00000639052 2548 ntBASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC22.17■■□□□ 1.14
CCDC141Q6ZP82 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AP000356.3-201ENST00000382243 753 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AL512430.1-201ENST00000392575 860 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AC026320.2-201ENST00000434379 478 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 RPL18AP3-201ENST00000462885 528 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 CTBP2P4-201ENST00000513884 920 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 TMCO5B-205ENST00000530020 894 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 DNM1P30-201ENST00000563586 452 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 MIR4522-201ENST00000584932 87 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AC103810.10-201ENST00000606504 343 ntBASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCDC141Q6ZP82 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCDC141Q6ZP82 AP002803.1-201ENST00000528836 498 ntBASIC22.15■■□□□ 1.14
CCDC141Q6ZP82 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC141Q6ZP82 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC22.15■■□□□ 1.14
CCDC141Q6ZP82 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC22.15■■□□□ 1.14
CCDC141Q6ZP82 LINC01783-202ENST00000614408 828 ntBASIC22.15■■□□□ 1.14
CCDC141Q6ZP82 BX284668.2-205ENST00000619677 828 ntBASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms