Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 AC138969.2-201ENST00000532739 9932 ntBASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.66■□□□□ 0.42
PDZRN4Q6ZMN7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 HLA-H-201ENST00000383620 1096 ntBASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 AC097493.3-201ENST00000509725 367 ntBASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 AC089987.1-201ENST00000551654 2209 ntBASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 FOXO1B-201ENST00000504678 1527 ntBASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDZRN4Q6ZMN7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PDZRN4Q6ZMN7 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDZRN4Q6ZMN7 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PDZRN4Q6ZMN7 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
PDZRN4Q6ZMN7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 AC073439.1-201ENST00000624121 1774 ntBASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 PPT1-213ENST00000641319 2388 ntBASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDZRN4Q6ZMN7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms