Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
REEP3Q6NUK4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 AC067863.1-201ENST00000494933 530 ntBASIC14.23□□□□□ -0.13
REEP3Q6NUK4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 AL844908.2-201ENST00000609461 460 ntBASIC14.23□□□□□ -0.13
REEP3Q6NUK4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 AC079781.4-201ENST00000641908 219 ntBASIC14.23□□□□□ -0.13
REEP3Q6NUK4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
REEP3Q6NUK4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.22□□□□□ -0.13
REEP3Q6NUK4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AC114501.2-201ENST00000439631 535 ntBASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.22□□□□□ -0.13
REEP3Q6NUK4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.22□□□□□ -0.13
REEP3Q6NUK4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms