Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HIST2H2BCQ6DN03 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 KRT17P5-201ENST00000332088 839 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 RNA5SP359-201ENST00000364838 113 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AC106827.1-201ENST00000366454 431 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AC083801.1-201ENST00000491689 358 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AC007952.4-201ENST00000573866 637 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 RPS5-204ENST00000598098 536 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CYP4F23P-201ENST00000593402 1579 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AC068880.1-201ENST00000507289 2297 ntBASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HIST2H2BCQ6DN03 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 AC006058.4-201ENST00000624016 1670 ntBASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 ACTG1P19-201ENST00000418987 1116 ntBASIC12.8□□□□□ -0.36
HIST2H2BCQ6DN03 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms