Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 KRT8P13-201ENST00000463294 1010 ntBASIC16.11■□□□□ 0.17
VARS2Q5ST30 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 FTLP10-202ENST00000505798 471 ntBASIC16.11■□□□□ 0.17
VARS2Q5ST30 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 CLIC4P2-201ENST00000601934 717 ntBASIC16.11■□□□□ 0.17
VARS2Q5ST30 AL137246.1-201ENST00000607072 977 ntBASIC16.11■□□□□ 0.17
VARS2Q5ST30 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 LINC00554-201ENST00000564841 3011 ntBASIC16.11■□□□□ 0.17
VARS2Q5ST30 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.11■□□□□ 0.17
VARS2Q5ST30 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VARS2Q5ST30 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.11■□□□□ 0.17
VARS2Q5ST30 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 KRT8P4-201ENST00000509735 1454 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 AC012508.2-201ENST00000567613 1472 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AL137783.1-201ENST00000623494 1896 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AC079178.1-201ENST00000420915 656 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 HSPB1P2-201ENST00000448722 546 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 MESTP3-201ENST00000503460 968 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AP001258.2-201ENST00000529891 490 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ZACNP1-201ENST00000612259 710 ntBASIC16.1■□□□□ 0.17
VARS2Q5ST30 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VARS2Q5ST30 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.1■□□□□ 0.17
VARS2Q5ST30 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms