Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 FGFR3P5-201ENST00000564496 886 ntBASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 RN7SL574P-201ENST00000581512 297 ntBASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AC018635.2-201ENST00000608625 364 ntBASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CROCCP1-201ENST00000426910 5675 ntBASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTC1Q2NKJ3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PRKXP1-201ENST00000561423 1122 ntBASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AL645939.5-201ENST00000606834 243 ntBASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AL353726.2-201ENST00000623259 884 ntBASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PRSS30P-206ENST00000641773 873 ntBASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTC1Q2NKJ3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AC148477.4-201ENST00000613430 1793 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 AC138035.3-201ENST00000622706 2791 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.23■□□□□ 0.19
CTC1Q2NKJ3 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms