Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
ATP7AQ04656 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP7AQ04656 PSMD4P1-201ENST00000433951 1109 ntBASIC21.92■■□□□ 1.1
ATP7AQ04656 AL354861.1-201ENST00000445213 355 ntBASIC21.92■■□□□ 1.1
ATP7AQ04656 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC21.92■■□□□ 1.1
ATP7AQ04656 RN7SL277P-201ENST00000481521 288 ntBASIC21.92■■□□□ 1.1
ATP7AQ04656 LINC00634-202ENST00000505157 222 ntBASIC21.92■■□□□ 1.1
ATP7AQ04656 ALG1L6P-201ENST00000515248 758 ntBASIC21.92■■□□□ 1.1
ATP7AQ04656 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC21.92■■□□□ 1.1
ATP7AQ04656 CR383656.3-201ENST00000551315 183 ntBASIC21.92■■□□□ 1.1
ATP7AQ04656 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC21.92■■□□□ 1.1
ATP7AQ04656 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC21.92■■□□□ 1.1
ATP7AQ04656 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP7AQ04656 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP7AQ04656 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ATP7AQ04656 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP7AQ04656 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC21.92■■□□□ 1.1
ATP7AQ04656 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
ATP7AQ04656 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC21.91■■□□□ 1.1
ATP7AQ04656 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP7AQ04656 ST13P19-201ENST00000442505 1124 ntBASIC21.91■■□□□ 1.1
ATP7AQ04656 REEP5-205ENST00000504247 480 ntTSL 5 BASIC21.91■■□□□ 1.1
ATP7AQ04656 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP7AQ04656 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP7AQ04656 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC21.91■■□□□ 1.1
ATP7AQ04656 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP7AQ04656 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP7AQ04656 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATP7AQ04656 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP7AQ04656 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
ATP7AQ04656 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC21.91■■□□□ 1.1
ATP7AQ04656 AC009093.10-201ENST00000641956 1442 ntBASIC21.91■■□□□ 1.1
ATP7AQ04656 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC21.91■■□□□ 1.1
ATP7AQ04656 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
ATP7AQ04656 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.91■■□□□ 1.1
ATP7AQ04656 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
ATP7AQ04656 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP7AQ04656 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC21.9■■□□□ 1.1
ATP7AQ04656 AC092638.2-201ENST00000441105 947 ntBASIC21.9■■□□□ 1.1
ATP7AQ04656 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP7AQ04656 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
ATP7AQ04656 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
ATP7AQ04656 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
ATP7AQ04656 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP7AQ04656 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 F10-203ENST00000409306 1450 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP7AQ04656 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 Z69890.1-201ENST00000382990 339 ntBASIC21.9■■□□□ 1.1
ATP7AQ04656 HLA-DMA-203ENST00000395305 777 ntBASIC21.9■■□□□ 1.1
ATP7AQ04656 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC21.9■■□□□ 1.1
ATP7AQ04656 DUX4L50-201ENST00000455245 715 ntBASIC21.9■■□□□ 1.1
ATP7AQ04656 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP7AQ04656 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC21.9■■□□□ 1.1
ATP7AQ04656 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 AC138701.2-201ENST00000553634 226 ntBASIC21.9■■□□□ 1.1
ATP7AQ04656 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC21.9■■□□□ 1.1
ATP7AQ04656 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC21.9■■□□□ 1.1
ATP7AQ04656 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
ATP7AQ04656 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
ATP7AQ04656 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
ATP7AQ04656 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ATP7AQ04656 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC21.89■■□□□ 1.1
ATP7AQ04656 AC020658.6-201ENST00000623564 1870 ntBASIC21.89■■□□□ 1.1
ATP7AQ04656 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATP7AQ04656 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
ATP7AQ04656 AC126365.1-201ENST00000578585 1514 ntBASIC21.89■■□□□ 1.1
ATP7AQ04656 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
ATP7AQ04656 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC21.89■■□□□ 1.09
ATP7AQ04656 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ATP7AQ04656 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP7AQ04656 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC21.89■■□□□ 1.09
ATP7AQ04656 ALG1L13P-202ENST00000519320 584 ntBASIC21.89■■□□□ 1.09
ATP7AQ04656 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC21.89■■□□□ 1.09
ATP7AQ04656 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
ATP7AQ04656 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ATP7AQ04656 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ATP7AQ04656 AC007952.4-201ENST00000573866 637 ntBASIC21.89■■□□□ 1.09
ATP7AQ04656 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC21.89■■□□□ 1.09
ATP7AQ04656 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC21.89■■□□□ 1.09
ATP7AQ04656 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms