Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC131212.3-201ENST00000624087 4219 ntBASIC11.76□□□□□ -0.53
HIST1H1AQ02539 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 RPP21-221ENST00000428040 594 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 COX10-202ENST00000429152 875 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC023141.5-201ENST00000458585 616 ntBASIC11.76□□□□□ -0.53
HIST1H1AQ02539 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC092865.5-201ENST00000545435 363 ntBASIC11.76□□□□□ -0.53
HIST1H1AQ02539 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC093520.2-201ENST00000561830 333 ntBASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC026150.2-201ENST00000564693 1156 ntBASIC11.76□□□□□ -0.53
HIST1H1AQ02539 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AL035456.1-201ENST00000456064 1369 ntBASIC11.76□□□□□ -0.53
HIST1H1AQ02539 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
HIST1H1AQ02539 AL031595.1-201ENST00000623969 4709 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 RDX-218ENST00000544551 4117 ntTSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC136604.1-201ENST00000418535 575 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 UPF3AP3-201ENST00000420996 769 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 SPDYE14P-201ENST00000442619 822 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC112482.1-201ENST00000492080 688 ntBASIC11.75□□□□□ -0.53
HIST1H1AQ02539 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
HIST1H1AQ02539 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms