Protein–RNA interactions for Protein: Q01628

IFITM3, Interferon-induced transmembrane protein 3, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM3Q01628 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 KRT17P2-201ENST00000300992 1314 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 AC110048.1-201ENST00000604293 2157 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 AP003969.2-201ENST00000623739 2275 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
IFITM3Q01628 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
IFITM3Q01628 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
IFITM3Q01628 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.17□□□□□ -0.3
IFITM3Q01628 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
IFITM3Q01628 AC005521.1-201ENST00000393351 872 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 RPS8P6-201ENST00000426177 609 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 DUSP5P1-201ENST00000441325 1139 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 AL078644.1-201ENST00000609881 752 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 ACTL9-202ENST00000612068 1252 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
IFITM3Q01628 PCDHB19P-202ENST00000625133 2914 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
IFITM3Q01628 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 RN7SL832P-201ENST00000607781 1756 ntBASIC13.17□□□□□ -0.3
IFITM3Q01628 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
IFITM3Q01628 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.16□□□□□ -0.3
IFITM3Q01628 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.16□□□□□ -0.3
IFITM3Q01628 AC011700.1-201ENST00000610409 2627 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.16□□□□□ -0.3
IFITM3Q01628 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.16□□□□□ -0.3
IFITM3Q01628 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.16□□□□□ -0.3
IFITM3Q01628 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
IFITM3Q01628 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.16□□□□□ -0.3
IFITM3Q01628 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.16□□□□□ -0.3
IFITM3Q01628 AC136604.1-201ENST00000418535 575 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 POM121L3P-201ENST00000419331 1163 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 BX664615.1-201ENST00000443558 458 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 EEF1DP4-201ENST00000446006 880 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 KRT18P31-201ENST00000506277 1292 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.16□□□□□ -0.3
IFITM3Q01628 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
IFITM3Q01628 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.16□□□□□ -0.3
IFITM3Q01628 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
IFITM3Q01628 Z69720.1-201ENST00000601483 472 ntBASIC13.16□□□□□ -0.3
IFITM3Q01628 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
IFITM3Q01628 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
IFITM3Q01628 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.16□□□□□ -0.3
IFITM3Q01628 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.16□□□□□ -0.3
IFITM3Q01628 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
IFITM3Q01628 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms