Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.76□□□□□ -0.21
CDK5Q00535 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 AC004066.1-201ENST00000502488 802 ntBASIC13.76□□□□□ -0.21
CDK5Q00535 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.76□□□□□ -0.21
CDK5Q00535 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.76□□□□□ -0.21
CDK5Q00535 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 AC011474.4-201ENST00000623523 2076 ntBASIC13.76□□□□□ -0.21
CDK5Q00535 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 AL157414.3-201ENST00000624276 1954 ntBASIC13.76□□□□□ -0.21
CDK5Q00535 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.76□□□□□ -0.21
CDK5Q00535 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.76□□□□□ -0.21
CDK5Q00535 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDK5Q00535 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CDK5Q00535 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.75□□□□□ -0.21
CDK5Q00535 POLD2P1-201ENST00000511220 997 ntBASIC13.75□□□□□ -0.21
CDK5Q00535 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.75□□□□□ -0.21
CDK5Q00535 AC022447.6-201ENST00000515522 438 ntBASIC13.75□□□□□ -0.21
CDK5Q00535 AL512361.1-201ENST00000554200 418 ntBASIC13.75□□□□□ -0.21
CDK5Q00535 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.75□□□□□ -0.21
CDK5Q00535 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
CDK5Q00535 MIR4469-201ENST00000583919 79 ntBASIC13.75□□□□□ -0.21
CDK5Q00535 AC004835.2-201ENST00000603762 682 ntBASIC13.75□□□□□ -0.21
CDK5Q00535 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.75□□□□□ -0.21
CDK5Q00535 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.75□□□□□ -0.21
CDK5Q00535 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDK5Q00535 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.75□□□□□ -0.21
CDK5Q00535 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.74□□□□□ -0.21
CDK5Q00535 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.74□□□□□ -0.21
CDK5Q00535 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 MST1P2-201ENST00000457982 2291 ntBASIC13.74□□□□□ -0.21
CDK5Q00535 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.74□□□□□ -0.21
CDK5Q00535 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.74□□□□□ -0.21
CDK5Q00535 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.74□□□□□ -0.21
CDK5Q00535 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.74□□□□□ -0.21
CDK5Q00535 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.74□□□□□ -0.21
CDK5Q00535 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC13.74□□□□□ -0.21
CDK5Q00535 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CDK5Q00535 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDK5Q00535 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms