Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
HSPG2P98160 LINC02199-201ENST00000506655 2702 ntBASIC9.08□□□□□ -0.96
HSPG2P98160 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC9.08□□□□□ -0.96
HSPG2P98160 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC9.08□□□□□ -0.96
HSPG2P98160 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
HSPG2P98160 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC9.08□□□□□ -0.96
HSPG2P98160 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC9.08□□□□□ -0.96
HSPG2P98160 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC9.08□□□□□ -0.96
HSPG2P98160 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC9.08□□□□□ -0.96
HSPG2P98160 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC9.08□□□□□ -0.96
HSPG2P98160 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC9.08□□□□□ -0.96
HSPG2P98160 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
HSPG2P98160 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
HSPG2P98160 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 PIFO-201ENST00000369737 746 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC9.07□□□□□ -0.96
HSPG2P98160 IFNWP2-201ENST00000431203 580 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 RPS23-207ENST00000511844 530 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC9.07□□□□□ -0.96
HSPG2P98160 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
HSPG2P98160 KRT8P6-201ENST00000399259 1207 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
HSPG2P98160 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 DUX4L50-201ENST00000455245 715 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC9.07□□□□□ -0.96
HSPG2P98160 RN7SL277P-201ENST00000481521 288 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC9.07□□□□□ -0.96
HSPG2P98160 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 AC006372.4-201ENST00000624122 1543 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 AC092127.1-201ENST00000567093 3455 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC9.07□□□□□ -0.96
HSPG2P98160 HNRNPA1P27-201ENST00000412087 955 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
HSPG2P98160 PFN2-212ENST00000490975 858 ntTSL 4 BASIC9.07□□□□□ -0.96
HSPG2P98160 GPX3-202ENST00000517973 612 ntTSL 3 BASIC9.07□□□□□ -0.96
HSPG2P98160 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 AC078814.4-201ENST00000546650 327 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC9.07□□□□□ -0.96
HSPG2P98160 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC9.07□□□□□ -0.96
HSPG2P98160 AL591424.3-201ENST00000614278 872 ntBASIC9.07□□□□□ -0.96
HSPG2P98160 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
HSPG2P98160 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC9.06□□□□□ -0.96
HSPG2P98160 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC9.06□□□□□ -0.96
HSPG2P98160 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
HSPG2P98160 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.06□□□□□ -0.96
HSPG2P98160 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 AC138761.6-201ENST00000583997 1423 ntBASIC9.06□□□□□ -0.96
HSPG2P98160 WASH3P-207ENST00000560956 1394 ntBASIC9.06□□□□□ -0.96
HSPG2P98160 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 OLA1P2-201ENST00000395519 1264 ntBASIC9.06□□□□□ -0.96
HSPG2P98160 AC098934.1-203ENST00000442868 1262 ntBASIC9.06□□□□□ -0.96
HSPG2P98160 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
HSPG2P98160 MIR4254-201ENST00000581063 76 ntBASIC9.06□□□□□ -0.96
HSPG2P98160 AC005865.2-202ENST00000635814 725 ntBASIC9.06□□□□□ -0.96
HSPG2P98160 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms