Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 KRT8P35-201ENST00000483942 1338 ntBASIC14.49□□□□□ -0.09
SKP1P63208 AC134312.5-201ENST00000568031 1313 ntBASIC14.49□□□□□ -0.09
SKP1P63208 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SKP1P63208 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SKP1P63208 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SKP1P63208 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.49□□□□□ -0.09
SKP1P63208 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SKP1P63208 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 AC093433.1-201ENST00000458048 571 ntBASIC14.49□□□□□ -0.09
SKP1P63208 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.49□□□□□ -0.09
SKP1P63208 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 AC022616.1-201ENST00000518688 554 ntBASIC14.49□□□□□ -0.09
SKP1P63208 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.49□□□□□ -0.09
SKP1P63208 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.49□□□□□ -0.09
SKP1P63208 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.49□□□□□ -0.09
SKP1P63208 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.49□□□□□ -0.09
SKP1P63208 AC233724.13-201ENST00000598383 410 ntBASIC14.49□□□□□ -0.09
SKP1P63208 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.49□□□□□ -0.09
SKP1P63208 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.49□□□□□ -0.09
SKP1P63208 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SKP1P63208 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.49□□□□□ -0.09
SKP1P63208 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SKP1P63208 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 BOLA2P3-201ENST00000404566 256 ntBASIC14.48□□□□□ -0.09
SKP1P63208 KLF2P2-201ENST00000416807 1039 ntBASIC14.48□□□□□ -0.09
SKP1P63208 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 C2orf27AP3-201ENST00000434123 579 ntBASIC14.48□□□□□ -0.09
SKP1P63208 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 AC106886.1-201ENST00000568660 600 ntBASIC14.48□□□□□ -0.09
SKP1P63208 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
SKP1P63208 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 AL354718.3-201ENST00000616414 581 ntBASIC14.48□□□□□ -0.09
SKP1P63208 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 CR382287.1-201ENST00000623954 586 ntBASIC14.48□□□□□ -0.09
SKP1P63208 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 REXO1L4P-201ENST00000605109 1937 ntBASIC14.48□□□□□ -0.09
SKP1P63208 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SKP1P63208 AL109954.1-202ENST00000564051 2148 ntBASIC14.48□□□□□ -0.09
SKP1P63208 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms