Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 PRSS29P-201ENST00000440800 595 ntBASIC11.98□□□□□ -0.49
FAM3BP58499 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 AC087641.1-201ENST00000557561 1021 ntBASIC11.98□□□□□ -0.49
FAM3BP58499 AC012640.2-201ENST00000561606 901 ntBASIC11.98□□□□□ -0.49
FAM3BP58499 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 GGTLC5P-201ENST00000617623 998 ntBASIC11.98□□□□□ -0.49
FAM3BP58499 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.98□□□□□ -0.49
FAM3BP58499 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.98□□□□□ -0.49
FAM3BP58499 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.98□□□□□ -0.49
FAM3BP58499 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
FAM3BP58499 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
FAM3BP58499 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 TP73-211ENST00000604074 4806 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
FAM3BP58499 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC073621.1-201ENST00000392730 636 ntBASIC11.97□□□□□ -0.49
FAM3BP58499 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 MIR940-201ENST00000401276 94 ntBASIC11.97□□□□□ -0.49
FAM3BP58499 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.97□□□□□ -0.49
FAM3BP58499 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.97□□□□□ -0.49
FAM3BP58499 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC009947.1-201ENST00000444350 727 ntBASIC11.97□□□□□ -0.49
FAM3BP58499 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC108751.1-201ENST00000490852 363 ntBASIC11.97□□□□□ -0.49
FAM3BP58499 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.97□□□□□ -0.49
FAM3BP58499 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
FAM3BP58499 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC11.97□□□□□ -0.49
FAM3BP58499 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.97□□□□□ -0.49
FAM3BP58499 AL139424.1-201ENST00000607572 797 ntBASIC11.97□□□□□ -0.49
FAM3BP58499 AC139530.3-201ENST00000620344 690 ntBASIC11.97□□□□□ -0.49
FAM3BP58499 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.97□□□□□ -0.49
FAM3BP58499 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms