Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 MIR661-201ENST00000384842 89 ntBASIC14.04□□□□□ -0.16
CDH11P55287 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CDH11P55287 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH11P55287 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.04□□□□□ -0.16
CDH11P55287 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.04□□□□□ -0.16
CDH11P55287 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 AC015656.1-201ENST00000624209 3578 ntBASIC14.04□□□□□ -0.16
CDH11P55287 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CDH11P55287 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.04□□□□□ -0.16
CDH11P55287 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.04□□□□□ -0.16
CDH11P55287 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH11P55287 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH11P55287 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH11P55287 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH11P55287 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.03□□□□□ -0.16
CDH11P55287 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH11P55287 SERBP1P5-201ENST00000510079 1181 ntBASIC14.03□□□□□ -0.16
CDH11P55287 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
CDH11P55287 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.03□□□□□ -0.16
CDH11P55287 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 AC009118.2-201ENST00000613275 655 ntBASIC14.03□□□□□ -0.16
CDH11P55287 TEX28P1-201ENST00000613479 1221 ntBASIC14.03□□□□□ -0.16
CDH11P55287 TEX28P2-201ENST00000617764 1221 ntBASIC14.03□□□□□ -0.16
CDH11P55287 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH11P55287 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH11P55287 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH11P55287 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CDH11P55287 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.03□□□□□ -0.16
CDH11P55287 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDH11P55287 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms