Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB28P51157 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.69□□□□□ -0.06
RAB28P51157 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB28P51157 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.69□□□□□ -0.06
RAB28P51157 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RAB28P51157 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB28P51157 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RAB28P51157 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.69□□□□□ -0.06
RAB28P51157 TCAF2P1-201ENST00000291129 2421 ntBASIC14.68□□□□□ -0.06
RAB28P51157 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
RAB28P51157 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 CROCCP4-201ENST00000457096 498 ntBASIC14.68□□□□□ -0.06
RAB28P51157 ACA64.2-201ENST00000459014 129 ntBASIC14.68□□□□□ -0.06
RAB28P51157 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB28P51157 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB28P51157 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 AL512343.1-201ENST00000605837 169 ntBASIC14.68□□□□□ -0.06
RAB28P51157 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.68□□□□□ -0.06
RAB28P51157 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.68□□□□□ -0.06
RAB28P51157 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 PCDHA3-202ENST00000532566 4594 ntBASIC14.68□□□□□ -0.06
RAB28P51157 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.68□□□□□ -0.06
RAB28P51157 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RAB28P51157 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 ACE3P-201ENST00000423435 1973 ntBASIC14.67□□□□□ -0.06
RAB28P51157 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 AC144831.1-201ENST00000573312 2656 ntBASIC14.67□□□□□ -0.06
RAB28P51157 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB28P51157 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.67□□□□□ -0.06
RAB28P51157 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB28P51157 HILS1-202ENST00000545329 423 ntBASIC14.67□□□□□ -0.06
RAB28P51157 KRT90P-201ENST00000549264 1064 ntBASIC14.67□□□□□ -0.06
RAB28P51157 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.67□□□□□ -0.06
RAB28P51157 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 ENPP7P14-201ENST00000621765 1040 ntBASIC14.67□□□□□ -0.06
RAB28P51157 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RAB28P51157 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RAB28P51157 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms