Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPT1AP50416 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CPT1AP50416 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 AL596276.2-201ENST00000447525 331 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.7■□□□□ 0.26
CPT1AP50416 MPRIPP1-201ENST00000452433 1089 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 AC090857.1-201ENST00000527400 390 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.7■□□□□ 0.26
CPT1AP50416 MIR4722-201ENST00000578292 60 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 AL359258.3-201ENST00000622910 2331 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 AC092850.2-201ENST00000623821 2697 ntBASIC16.7■□□□□ 0.26
CPT1AP50416 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CPT1AP50416 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CPT1AP50416 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPT1AP50416 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CPT1AP50416 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CPT1AP50416 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CPT1AP50416 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 TLE1P1-201ENST00000422965 589 ntBASIC16.69■□□□□ 0.26
CPT1AP50416 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 EEF1DP6-201ENST00000449232 372 ntBASIC16.69■□□□□ 0.26
CPT1AP50416 AL353637.1-201ENST00000451571 732 ntBASIC16.69■□□□□ 0.26
CPT1AP50416 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.69■□□□□ 0.26
CPT1AP50416 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 AL160314.3-201ENST00000556041 767 ntBASIC16.69■□□□□ 0.26
CPT1AP50416 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.69■□□□□ 0.26
CPT1AP50416 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.69■□□□□ 0.26
CPT1AP50416 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CPT1AP50416 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CPT1AP50416 AL008718.2-201ENST00000609206 1313 ntBASIC16.69■□□□□ 0.26
CPT1AP50416 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CPT1AP50416 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.68■□□□□ 0.26
CPT1AP50416 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 AC091046.1-201ENST00000331871 207 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.68■□□□□ 0.26
CPT1AP50416 RPS2P36-201ENST00000456516 831 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.68■□□□□ 0.26
CPT1AP50416 RCC2P8-201ENST00000502779 1035 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.68■□□□□ 0.26
CPT1AP50416 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.68■□□□□ 0.26
CPT1AP50416 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.68■□□□□ 0.26
CPT1AP50416 AC009779.1-201ENST00000551138 283 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.68■□□□□ 0.26
CPT1AP50416 AC008805.1-201ENST00000590892 364 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.68■□□□□ 0.26
CPT1AP50416 AC009884.2-201ENST00000603110 324 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms