Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC9A3P48764 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC006504.5-208ENST00000588784 2401 ntBASIC14.06□□□□□ -0.16
SLC9A3P48764 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC9A3P48764 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC074338.1-201ENST00000416825 156 ntBASIC14.06□□□□□ -0.16
SLC9A3P48764 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC9A3P48764 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC9A3P48764 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC025048.3-201ENST00000590609 569 ntBASIC14.06□□□□□ -0.16
SLC9A3P48764 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC005702.4-201ENST00000618393 416 ntBASIC14.06□□□□□ -0.16
SLC9A3P48764 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC117489.1-201ENST00000625169 3217 ntBASIC14.06□□□□□ -0.16
SLC9A3P48764 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 AL023775.1-201ENST00000454907 1746 ntBASIC14.06□□□□□ -0.16
SLC9A3P48764 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC9A3P48764 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC9A3P48764 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC9A3P48764 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 REXO1L2P-201ENST00000425429 2069 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 AC015922.1-201ENST00000421102 1152 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.05□□□□□ -0.16
SLC9A3P48764 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 AP006288.1-201ENST00000446065 395 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 HLA-V-204ENST00000476601 1289 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 AC069262.1-201ENST00000539058 672 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms