Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 KRT8P44-201ENST00000441609 1350 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 FGD5P1-202ENST00000614866 2498 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 MEP1AP4-201ENST00000423244 1087 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HTR3AP46098 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.14□□□□□ -0.15
HTR3AP46098 FAM8A3P-201ENST00000427218 844 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.14□□□□□ -0.15
HTR3AP46098 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.14□□□□□ -0.15
HTR3AP46098 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.14□□□□□ -0.15
HTR3AP46098 AL390955.2-201ENST00000603032 514 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
HTR3AP46098 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 AGAP7P-201ENST00000582299 2062 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 AGAP14-201ENST00000624701 2060 ntBASIC14.14□□□□□ -0.15
HTR3AP46098 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.14□□□□□ -0.15
HTR3AP46098 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.14□□□□□ -0.15
HTR3AP46098 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HTR3AP46098 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.13□□□□□ -0.15
HTR3AP46098 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.13□□□□□ -0.15
HTR3AP46098 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HTR3AP46098 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
HTR3AP46098 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
HTR3AP46098 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
HTR3AP46098 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HTR3AP46098 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.13□□□□□ -0.15
HTR3AP46098 INGX-202ENST00000489074 768 ntBASIC14.13□□□□□ -0.15
HTR3AP46098 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.13□□□□□ -0.15
HTR3AP46098 AC005498.2-205ENST00000593218 784 ntBASIC14.13□□□□□ -0.15
HTR3AP46098 SRD5A3P1-201ENST00000603021 949 ntBASIC14.13□□□□□ -0.15
HTR3AP46098 AC000095.1-201ENST00000603208 874 ntBASIC14.13□□□□□ -0.15
HTR3AP46098 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.13□□□□□ -0.15
HTR3AP46098 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.13□□□□□ -0.15
HTR3AP46098 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HTR3AP46098 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
HTR3AP46098 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 MROH4P-201ENST00000431302 1578 ntBASIC14.13□□□□□ -0.15
HTR3AP46098 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HTR3AP46098 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms