Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNT3P45378 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TNNT3P45378 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TNNT3P45378 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TNNT3P45378 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC16.61■□□□□ 0.25
TNNT3P45378 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TNNT3P45378 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNNT3P45378 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.6■□□□□ 0.25
TNNT3P45378 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.6■□□□□ 0.25
TNNT3P45378 C20orf181-201ENST00000623918 480 ntBASIC16.6■□□□□ 0.25
TNNT3P45378 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 AC004899.2-201ENST00000622993 3860 ntBASIC16.6■□□□□ 0.25
TNNT3P45378 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TNNT3P45378 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TNNT3P45378 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC16.6■□□□□ 0.25
TNNT3P45378 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNNT3P45378 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC16.59■□□□□ 0.25
TNNT3P45378 AC027612.1-201ENST00000445234 2395 ntBASIC16.59■□□□□ 0.25
TNNT3P45378 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TNNT3P45378 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TNNT3P45378 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.59■□□□□ 0.25
TNNT3P45378 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TNNT3P45378 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 SPDYE11-202ENST00000450699 704 ntBASIC16.59■□□□□ 0.25
TNNT3P45378 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.59■□□□□ 0.25
TNNT3P45378 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.59■□□□□ 0.25
TNNT3P45378 SPDYE9P-201ENST00000570642 692 ntBASIC16.59■□□□□ 0.25
TNNT3P45378 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNNT3P45378 AL365330.1-201ENST00000607459 531 ntBASIC16.59■□□□□ 0.25
TNNT3P45378 SPDYE10P-202ENST00000612005 668 ntBASIC16.59■□□□□ 0.25
TNNT3P45378 SPDYE8P-202ENST00000612377 668 ntBASIC16.59■□□□□ 0.25
TNNT3P45378 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms