Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CEACAM3P40198 AC009486.1-201ENST00000569860 813 ntBASIC12.48□□□□□ -0.41
CEACAM3P40198 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.48□□□□□ -0.41
CEACAM3P40198 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.48□□□□□ -0.41
CEACAM3P40198 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CEACAM3P40198 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.48□□□□□ -0.41
CEACAM3P40198 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CEACAM3P40198 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CEACAM3P40198 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CEACAM3P40198 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 LHX6-205ENST00000464484 666 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.47□□□□□ -0.41
CEACAM3P40198 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 AL359711.2-201ENST00000563105 872 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CEACAM3P40198 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 CU634019.7-201ENST00000624153 1185 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 FP236241.2-201ENST00000624906 1185 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 AC025048.6-201ENST00000634326 1161 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 AL033527.5-201ENST00000641382 801 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 AL109954.1-202ENST00000564051 2148 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 AC023024.2-201ENST00000623561 1993 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CEACAM3P40198 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.47□□□□□ -0.41
CEACAM3P40198 PPT1-215ENST00000641471 2368 ntBASIC12.47□□□□□ -0.41
CEACAM3P40198 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CEACAM3P40198 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CEACAM3P40198 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CEACAM3P40198 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
CEACAM3P40198 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CEACAM3P40198 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
CEACAM3P40198 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CEACAM3P40198 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms