Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 AP003680.1-201ENST00000598970 3660 ntBASIC18.54■□□□□ 0.56
PDE6BP35913 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 RPL13AP19-201ENST00000434320 584 ntBASIC18.54■□□□□ 0.56
PDE6BP35913 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC18.54■□□□□ 0.56
PDE6BP35913 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE6BP35913 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE6BP35913 AL109837.1-201ENST00000603272 613 ntBASIC18.54■□□□□ 0.56
PDE6BP35913 MIR6769A-201ENST00000617340 73 ntBASIC18.54■□□□□ 0.56
PDE6BP35913 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
PDE6BP35913 AC009084.3-201ENST00000623356 437 ntBASIC18.54■□□□□ 0.56
PDE6BP35913 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.54■□□□□ 0.56
PDE6BP35913 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.54■□□□□ 0.56
PDE6BP35913 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 CAP2P1-201ENST00000557743 1390 ntBASIC18.54■□□□□ 0.56
PDE6BP35913 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDE6BP35913 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDE6BP35913 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDE6BP35913 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 RPL8P2-201ENST00000430538 502 ntBASIC18.53■□□□□ 0.56
PDE6BP35913 AC079112.1-201ENST00000454972 939 ntBASIC18.53■□□□□ 0.56
PDE6BP35913 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6BP35913 AC130709.1-201ENST00000484779 1212 ntBASIC18.53■□□□□ 0.56
PDE6BP35913 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDE6BP35913 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6BP35913 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6BP35913 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC18.53■□□□□ 0.56
PDE6BP35913 GMFG-209ENST00000600322 622 ntTSL 5 BASIC18.53■□□□□ 0.56
PDE6BP35913 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
PDE6BP35913 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.53■□□□□ 0.56
PDE6BP35913 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDE6BP35913 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.53■□□□□ 0.56
PDE6BP35913 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDE6BP35913 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDE6BP35913 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDE6BP35913 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 AL627389.1-201ENST00000413508 1182 ntBASIC18.52■□□□□ 0.56
PDE6BP35913 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.52■□□□□ 0.56
PDE6BP35913 CTBP2P4-201ENST00000513884 920 ntBASIC18.52■□□□□ 0.56
PDE6BP35913 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.52■□□□□ 0.56
PDE6BP35913 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDE6BP35913 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC18.52■□□□□ 0.56
PDE6BP35913 FOS-204ENST00000554617 796 ntTSL 2 BASIC18.52■□□□□ 0.56
PDE6BP35913 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PDE6BP35913 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.52■□□□□ 0.56
PDE6BP35913 AL157813.1-201ENST00000612996 587 ntBASIC18.52■□□□□ 0.56
PDE6BP35913 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms