Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.1■□□□□ 0.17
CHKAP35790 ATP5G2P4-201ENST00000442175 420 ntBASIC16.1■□□□□ 0.17
CHKAP35790 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.1■□□□□ 0.17
CHKAP35790 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.1■□□□□ 0.17
CHKAP35790 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.1■□□□□ 0.17
CHKAP35790 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.1■□□□□ 0.17
CHKAP35790 RAB43P1-201ENST00000561790 589 ntBASIC16.1■□□□□ 0.17
CHKAP35790 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.1■□□□□ 0.17
CHKAP35790 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.1■□□□□ 0.17
CHKAP35790 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CHKAP35790 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CHKAP35790 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.09■□□□□ 0.17
CHKAP35790 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHKAP35790 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CHKAP35790 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CHKAP35790 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 ARSEP1-201ENST00000420443 635 ntBASIC16.09■□□□□ 0.17
CHKAP35790 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.09■□□□□ 0.17
CHKAP35790 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.09■□□□□ 0.17
CHKAP35790 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.09■□□□□ 0.17
CHKAP35790 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 AC026410.3-201ENST00000514280 936 ntBASIC16.09■□□□□ 0.17
CHKAP35790 IGHV3-71-201ENST00000523324 359 ntBASIC16.09■□□□□ 0.17
CHKAP35790 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.09■□□□□ 0.17
CHKAP35790 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.09■□□□□ 0.17
CHKAP35790 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CHKAP35790 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.09■□□□□ 0.17
CHKAP35790 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.09■□□□□ 0.17
CHKAP35790 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 AC008735.3-201ENST00000596646 500 ntBASIC16.09■□□□□ 0.17
CHKAP35790 AC093813.1-201ENST00000605066 256 ntBASIC16.09■□□□□ 0.17
CHKAP35790 AC017083.2-201ENST00000608069 979 ntBASIC16.09■□□□□ 0.17
CHKAP35790 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CHKAP35790 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHKAP35790 AC063926.3-201ENST00000624734 5658 ntBASIC16.08■□□□□ 0.17
CHKAP35790 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHKAP35790 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.08■□□□□ 0.17
CHKAP35790 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHKAP35790 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHKAP35790 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.08■□□□□ 0.16
CHKAP35790 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHKAP35790 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CHKAP35790 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.08■□□□□ 0.16
CHKAP35790 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CHKAP35790 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.08■□□□□ 0.16
CHKAP35790 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CHKAP35790 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 KRT43P-201ENST00000434019 910 ntBASIC16.08■□□□□ 0.16
CHKAP35790 ACA64.2-201ENST00000459014 129 ntBASIC16.08■□□□□ 0.16
CHKAP35790 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHKAP35790 PTP4A1P2-201ENST00000546033 454 ntBASIC16.08■□□□□ 0.16
CHKAP35790 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.08■□□□□ 0.16
CHKAP35790 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.08■□□□□ 0.16
CHKAP35790 AC009486.1-201ENST00000569860 813 ntBASIC16.08■□□□□ 0.16
CHKAP35790 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms