Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 INE1-201ENST00000456273 945 ntBASIC13.08□□□□□ -0.32
TNFSF4P23510 GAPDHP40-201ENST00000505218 1006 ntBASIC13.08□□□□□ -0.32
TNFSF4P23510 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.08□□□□□ -0.32
TNFSF4P23510 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.08□□□□□ -0.32
TNFSF4P23510 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.08□□□□□ -0.32
TNFSF4P23510 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.08□□□□□ -0.32
TNFSF4P23510 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.08□□□□□ -0.32
TNFSF4P23510 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TNFSF4P23510 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.08□□□□□ -0.32
TNFSF4P23510 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TNFSF4P23510 AC009090.5-201ENST00000624886 2285 ntBASIC13.08□□□□□ -0.32
TNFSF4P23510 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TNFSF4P23510 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC148477.4-201ENST00000613430 1793 ntBASIC13.07□□□□□ -0.32
TNFSF4P23510 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 ACKR1-201ENST00000368121 1240 ntBASIC13.07□□□□□ -0.32
TNFSF4P23510 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.07□□□□□ -0.32
TNFSF4P23510 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.07□□□□□ -0.32
TNFSF4P23510 COX5BP8-201ENST00000416911 349 ntBASIC13.07□□□□□ -0.32
TNFSF4P23510 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 GAPDHP21-201ENST00000450301 1010 ntBASIC13.07□□□□□ -0.32
TNFSF4P23510 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.07□□□□□ -0.32
TNFSF4P23510 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 TDH-203ENST00000531764 1110 ntBASIC13.07□□□□□ -0.32
TNFSF4P23510 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.07□□□□□ -0.32
TNFSF4P23510 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TNFSF4P23510 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TNFSF4P23510 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 AC126365.1-201ENST00000578585 1514 ntBASIC13.07□□□□□ -0.32
TNFSF4P23510 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TNFSF4P23510 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms