Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AL731571.1-201ENST00000617058 5428 ntBASIC13.41□□□□□ -0.26
RAB3BP20337 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RAB3BP20337 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB3BP20337 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RAB3BP20337 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB3BP20337 AL031284.1-201ENST00000419297 478 ntBASIC13.41□□□□□ -0.26
RAB3BP20337 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB3BP20337 UNC93B7-201ENST00000509439 705 ntBASIC13.41□□□□□ -0.26
RAB3BP20337 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB3BP20337 AC012313.10-201ENST00000623509 926 ntBASIC13.41□□□□□ -0.26
RAB3BP20337 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.41□□□□□ -0.26
RAB3BP20337 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RAB3BP20337 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.41□□□□□ -0.26
RAB3BP20337 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RAB3BP20337 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RAB3BP20337 CICP17-201ENST00000418553 2377 ntBASIC13.4□□□□□ -0.26
RAB3BP20337 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 AC089987.1-201ENST00000551654 2209 ntBASIC13.4□□□□□ -0.26
RAB3BP20337 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB3BP20337 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 AC093909.1-201ENST00000504731 1122 ntBASIC13.4□□□□□ -0.26
RAB3BP20337 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.4□□□□□ -0.26
RAB3BP20337 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.4□□□□□ -0.26
RAB3BP20337 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RAB3BP20337 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RAB3BP20337 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
RAB3BP20337 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
RAB3BP20337 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RAB3BP20337 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RAB3BP20337 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms