Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CTPS1P17812 TCAF2P1-201ENST00000291129 2421 ntBASIC15.33■□□□□ 0.04
CTPS1P17812 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 AGAP7P-201ENST00000582299 2062 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 AGAP14-201ENST00000624701 2060 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 AL645937.2-201ENST00000396808 931 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 AL355864.2-201ENST00000447420 863 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 AC114812.1-204ENST00000449669 728 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.32■□□□□ 0.04
CTPS1P17812 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.32■□□□□ 0.04
CTPS1P17812 BTNL10-201ENST00000595971 695 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 AC233724.13-201ENST00000598383 410 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 WASH3P-207ENST00000560956 1394 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 LINC00528-201ENST00000600723 2160 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 LRRC59-203ENST00000576448 1531 ntBASIC15.32■□□□□ 0.04
CTPS1P17812 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CTPS1P17812 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CTPS1P17812 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CTPS1P17812 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CTPS1P17812 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS1P17812 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CTPS1P17812 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CTPS1P17812 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CTPS1P17812 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.31■□□□□ 0.04
CTPS1P17812 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.31■□□□□ 0.04
CTPS1P17812 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 U91328.1-201ENST00000437528 223 ntBASIC15.31■□□□□ 0.04
CTPS1P17812 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.31■□□□□ 0.04
CTPS1P17812 CROCCP4-201ENST00000457096 498 ntBASIC15.31■□□□□ 0.04
CTPS1P17812 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS1P17812 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CTPS1P17812 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.31■□□□□ 0.04
CTPS1P17812 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
CTPS1P17812 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CTPS1P17812 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms