Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.75■□□□□ 0.11
BRAFP15056 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.75■□□□□ 0.11
BRAFP15056 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.75■□□□□ 0.11
BRAFP15056 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.75■□□□□ 0.11
BRAFP15056 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.75■□□□□ 0.11
BRAFP15056 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.75■□□□□ 0.11
BRAFP15056 AL844908.2-201ENST00000609461 460 ntBASIC15.75■□□□□ 0.11
BRAFP15056 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
BRAFP15056 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
BRAFP15056 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 CICP11-201ENST00000434745 2827 ntBASIC15.75■□□□□ 0.11
BRAFP15056 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.75■□□□□ 0.11
BRAFP15056 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRAFP15056 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.75■□□□□ 0.11
BRAFP15056 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.75■□□□□ 0.11
BRAFP15056 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
BRAFP15056 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BRAFP15056 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
BRAFP15056 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 AC097359.2-201ENST00000604992 2389 ntBASIC15.74■□□□□ 0.11
BRAFP15056 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
BRAFP15056 AL512638.1-201ENST00000457493 794 ntBASIC15.74■□□□□ 0.11
BRAFP15056 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 MIR4745-201ENST00000577608 62 ntBASIC15.74■□□□□ 0.11
BRAFP15056 MIR3197-201ENST00000582241 73 ntBASIC15.74■□□□□ 0.11
BRAFP15056 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.74■□□□□ 0.11
BRAFP15056 CYP4F24P-201ENST00000586049 1580 ntBASIC15.74■□□□□ 0.11
BRAFP15056 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 KRT8P12-202ENST00000472924 1397 ntBASIC15.74■□□□□ 0.11
BRAFP15056 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
BRAFP15056 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.74■□□□□ 0.11
BRAFP15056 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRAFP15056 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.73■□□□□ 0.11
BRAFP15056 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BRAFP15056 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
BRAFP15056 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 AC087499.5-201ENST00000452760 1342 ntBASIC15.73■□□□□ 0.11
BRAFP15056 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.73■□□□□ 0.11
BRAFP15056 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BRAFP15056 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
BRAFP15056 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
BRAFP15056 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.73■□□□□ 0.11
BRAFP15056 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRAFP15056 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms