Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
RARBP10826 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.97■□□□□ 0.31
RARBP10826 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 MARK2P5-201ENST00000507649 634 ntBASIC16.97■□□□□ 0.31
RARBP10826 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.97■□□□□ 0.31
RARBP10826 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 DUX4L47-201ENST00000566374 394 ntBASIC16.97■□□□□ 0.31
RARBP10826 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.97■□□□□ 0.31
RARBP10826 AL136301.1-201ENST00000615830 422 ntBASIC16.97■□□□□ 0.31
RARBP10826 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.97■□□□□ 0.31
RARBP10826 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.97■□□□□ 0.31
RARBP10826 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.97■□□□□ 0.31
RARBP10826 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.97■□□□□ 0.31
RARBP10826 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RARBP10826 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RARBP10826 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RARBP10826 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RARBP10826 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARBP10826 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RARBP10826 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.96■□□□□ 0.31
RARBP10826 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RARBP10826 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.96■□□□□ 0.31
RARBP10826 AP000593.2-201ENST00000542775 1433 ntBASIC16.96■□□□□ 0.31
RARBP10826 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RARBP10826 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.96■□□□□ 0.31
RARBP10826 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 HLA-K-203ENST00000430151 1046 ntBASIC16.96■□□□□ 0.31
RARBP10826 AC006335.1-201ENST00000445200 547 ntBASIC16.96■□□□□ 0.31
RARBP10826 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.96■□□□□ 0.31
RARBP10826 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.96■□□□□ 0.31
RARBP10826 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.96■□□□□ 0.31
RARBP10826 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.96■□□□□ 0.31
RARBP10826 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.96■□□□□ 0.31
RARBP10826 AC100827.2-201ENST00000563214 1194 ntBASIC16.96■□□□□ 0.31
RARBP10826 MIR4683-201ENST00000579659 81 ntBASIC16.96■□□□□ 0.31
RARBP10826 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.96■□□□□ 0.31
RARBP10826 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.96■□□□□ 0.31
RARBP10826 AL162426.1-201ENST00000624141 743 ntBASIC16.96■□□□□ 0.31
RARBP10826 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 AL157791.1-201ENST00000553667 1699 ntBASIC16.96■□□□□ 0.31
RARBP10826 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
RARBP10826 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.96■□□□□ 0.31
RARBP10826 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARBP10826 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.96■□□□□ 0.3
RARBP10826 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RARBP10826 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.96■□□□□ 0.3
RARBP10826 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RARBP10826 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RARBP10826 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RARBP10826 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.96■□□□□ 0.3
RARBP10826 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.96■□□□□ 0.3
RARBP10826 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARBP10826 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARBP10826 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.95■□□□□ 0.3
RARBP10826 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.95■□□□□ 0.3
RARBP10826 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RARBP10826 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARBP10826 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RARBP10826 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.95■□□□□ 0.3
RARBP10826 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARBP10826 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.95■□□□□ 0.3
RARBP10826 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARBP10826 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms