Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ZBED1P1-201ENST00000502364 1930 ntBASIC11.79□□□□□ -0.52
TRBV12-3P01733 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.79□□□□□ -0.52
TRBV12-3P01733 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 AL365209.1-201ENST00000624418 6473 ntBASIC11.79□□□□□ -0.52
TRBV12-3P01733 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRBV12-3P01733 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
TRBV12-3P01733 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ACE3P-201ENST00000423435 1973 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 KLF2P2-201ENST00000416807 1039 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC005034.1-201ENST00000426657 489 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 KRT17P7-201ENST00000451704 1104 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC007389.4-201ENST00000454674 793 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PIGL-212ENST00000581006 554 ntTSL 4 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC008735.3-201ENST00000596646 500 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 AL035252.4-201ENST00000624174 288 ntBASIC11.78□□□□□ -0.52
TRBV12-3P01733 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TRBV12-3P01733 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRBV12-3P01733 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms