Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.04■□□□□ 0.32
GGPS1O95749 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
GGPS1O95749 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GGPS1O95749 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GGPS1O95749 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 AC013268.4-201ENST00000637413 2228 ntBASIC17.03■□□□□ 0.32
GGPS1O95749 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
GGPS1O95749 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 AC079178.1-201ENST00000420915 656 ntBASIC17.03■□□□□ 0.32
GGPS1O95749 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.03■□□□□ 0.32
GGPS1O95749 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.03■□□□□ 0.32
GGPS1O95749 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.03■□□□□ 0.32
GGPS1O95749 HSPB1P2-201ENST00000448722 546 ntBASIC17.03■□□□□ 0.32
GGPS1O95749 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 AC138466.3-201ENST00000619983 221 ntBASIC17.03■□□□□ 0.32
GGPS1O95749 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.03■□□□□ 0.32
GGPS1O95749 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 KRT8P4-201ENST00000509735 1454 ntBASIC17.03■□□□□ 0.32
GGPS1O95749 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
GGPS1O95749 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.03■□□□□ 0.32
GGPS1O95749 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.03■□□□□ 0.32
GGPS1O95749 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 AL513477.1-201ENST00000602865 2407 ntBASIC17.02■□□□□ 0.32
GGPS1O95749 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GGPS1O95749 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 AC020658.6-201ENST00000623564 1870 ntBASIC17.02■□□□□ 0.32
GGPS1O95749 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GGPS1O95749 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
GGPS1O95749 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 MIR663B-201ENST00000408361 115 ntBASIC17.02■□□□□ 0.32
GGPS1O95749 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.02■□□□□ 0.32
GGPS1O95749 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.02■□□□□ 0.32
GGPS1O95749 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.02■□□□□ 0.32
GGPS1O95749 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.02■□□□□ 0.32
GGPS1O95749 FTLP10-202ENST00000505798 471 ntBASIC17.02■□□□□ 0.32
GGPS1O95749 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GGPS1O95749 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.02■□□□□ 0.32
GGPS1O95749 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.02■□□□□ 0.32
GGPS1O95749 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
GGPS1O95749 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
GGPS1O95749 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms