Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 ATXN7L3B-201ENST00000519948 7604 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
SNCGO76070 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC10.3□□□□□ -0.76
SNCGO76070 AC131009.4-201ENST00000624048 1740 ntBASIC10.3□□□□□ -0.76
SNCGO76070 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.3□□□□□ -0.76
SNCGO76070 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
SNCGO76070 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 AC092117.1-201ENST00000621230 3250 ntBASIC10.29□□□□□ -0.76
SNCGO76070 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
SNCGO76070 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC10.29□□□□□ -0.76
SNCGO76070 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 KLF13-207ENST00000560473 489 ntTSL 3 BASIC10.29□□□□□ -0.76
SNCGO76070 NAPSB-206ENST00000562112 1266 ntBASIC10.29□□□□□ -0.76
SNCGO76070 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC10.29□□□□□ -0.76
SNCGO76070 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC10.29□□□□□ -0.76
SNCGO76070 MIR4785-201ENST00000585005 73 ntBASIC10.29□□□□□ -0.76
SNCGO76070 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 AL138831.2-201ENST00000606564 490 ntBASIC10.29□□□□□ -0.76
SNCGO76070 AC113410.3-201ENST00000623366 203 ntBASIC10.29□□□□□ -0.76
SNCGO76070 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 GLDC-219ENST00000640208 420 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
SNCGO76070 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC10.29□□□□□ -0.76
SNCGO76070 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
SNCGO76070 AC026369.1-202ENST00000508953 4913 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
SNCGO76070 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
SNCGO76070 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC10.28□□□□□ -0.76
SNCGO76070 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC10.28□□□□□ -0.76
SNCGO76070 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC10.28□□□□□ -0.76
SNCGO76070 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SNCGO76070 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SNCGO76070 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SNCGO76070 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
SNCGO76070 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC10.28□□□□□ -0.76
SNCGO76070 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.28□□□□□ -0.76
SNCGO76070 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
SNCGO76070 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
SNCGO76070 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms