Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
RFPL1O75677 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 MEIS3P1-201ENST00000495167 958 ntBASIC15.32■□□□□ 0.04
RFPL1O75677 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.32■□□□□ 0.04
RFPL1O75677 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.32■□□□□ 0.04
RFPL1O75677 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.32■□□□□ 0.04
RFPL1O75677 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
RFPL1O75677 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.32■□□□□ 0.04
RFPL1O75677 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RFPL1O75677 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RFPL1O75677 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFPL1O75677 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.32■□□□□ 0.04
RFPL1O75677 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RFPL1O75677 AL928921.2-201ENST00000641325 2442 ntBASIC15.32■□□□□ 0.04
RFPL1O75677 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.31■□□□□ 0.04
RFPL1O75677 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.31■□□□□ 0.04
RFPL1O75677 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.31■□□□□ 0.04
RFPL1O75677 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.31■□□□□ 0.04
RFPL1O75677 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RFPL1O75677 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.31■□□□□ 0.04
RFPL1O75677 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.31■□□□□ 0.04
RFPL1O75677 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.31■□□□□ 0.04
RFPL1O75677 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.31■□□□□ 0.04
RFPL1O75677 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.31■□□□□ 0.04
RFPL1O75677 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 MIR6752-201ENST00000618442 71 ntBASIC15.31■□□□□ 0.04
RFPL1O75677 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.31■□□□□ 0.04
RFPL1O75677 AL033527.5-202ENST00000641632 1098 ntBASIC15.31■□□□□ 0.04
RFPL1O75677 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFPL1O75677 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RFPL1O75677 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.31■□□□□ 0.04
RFPL1O75677 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.31■□□□□ 0.04
RFPL1O75677 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RFPL1O75677 AC015656.1-201ENST00000624209 3578 ntBASIC15.31■□□□□ 0.04
RFPL1O75677 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.31■□□□□ 0.04
RFPL1O75677 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RFPL1O75677 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
RFPL1O75677 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RFPL1O75677 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RFPL1O75677 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFPL1O75677 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RFPL1O75677 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms