Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRCH4O75427 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
LRCH4O75427 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.83■□□□□ 0.12
LRCH4O75427 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LRCH4O75427 DUX4L47-201ENST00000566374 394 ntBASIC15.83■□□□□ 0.12
LRCH4O75427 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.83■□□□□ 0.12
LRCH4O75427 AC140912.1-201ENST00000577171 1054 ntBASIC15.83■□□□□ 0.12
LRCH4O75427 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.83■□□□□ 0.12
LRCH4O75427 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
LRCH4O75427 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 AC007191.1-201ENST00000623179 2995 ntBASIC15.83■□□□□ 0.12
LRCH4O75427 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
LRCH4O75427 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRCH4O75427 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
LRCH4O75427 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRCH4O75427 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
LRCH4O75427 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.82■□□□□ 0.12
LRCH4O75427 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
LRCH4O75427 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 KLF2P2-201ENST00000416807 1039 ntBASIC15.82■□□□□ 0.12
LRCH4O75427 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 WFDC1-204ENST00000613603 549 ntBASIC15.82■□□□□ 0.12
LRCH4O75427 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.82■□□□□ 0.12
LRCH4O75427 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
LRCH4O75427 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.82■□□□□ 0.12
LRCH4O75427 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LRCH4O75427 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRCH4O75427 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
LRCH4O75427 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.81■□□□□ 0.12
LRCH4O75427 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
LRCH4O75427 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
LRCH4O75427 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
LRCH4O75427 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
LRCH4O75427 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LRCH4O75427 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.81■□□□□ 0.12
LRCH4O75427 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.81■□□□□ 0.12
LRCH4O75427 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LRCH4O75427 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.81■□□□□ 0.12
LRCH4O75427 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms