Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL591163.1-201ENST00000641757 987 ntBASIC16.57■□□□□ 0.24
RNF40O75150 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RNF40O75150 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF40O75150 MYO15B-237ENST00000642007 4893 ntBASIC16.57■□□□□ 0.24
RNF40O75150 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF40O75150 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF40O75150 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF40O75150 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF40O75150 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF40O75150 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF40O75150 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF40O75150 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 AC148477.4-201ENST00000613430 1793 ntBASIC16.56■□□□□ 0.24
RNF40O75150 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RNF40O75150 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF40O75150 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF40O75150 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
RNF40O75150 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF40O75150 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF40O75150 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF40O75150 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.56■□□□□ 0.24
RNF40O75150 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF40O75150 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF40O75150 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF40O75150 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF40O75150 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.55■□□□□ 0.24
RNF40O75150 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF40O75150 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF40O75150 AL589702.1-201ENST00000641229 1509 ntBASIC16.55■□□□□ 0.24
RNF40O75150 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 KRT8P44-201ENST00000441609 1350 ntBASIC16.55■□□□□ 0.24
RNF40O75150 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF40O75150 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF40O75150 AC114501.2-201ENST00000439631 535 ntBASIC16.55■□□□□ 0.24
RNF40O75150 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF40O75150 AC011495.1-201ENST00000498085 584 ntBASIC16.55■□□□□ 0.24
RNF40O75150 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF40O75150 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 AC026979.3-201ENST00000607315 403 ntBASIC16.55■□□□□ 0.24
RNF40O75150 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF40O75150 AL033527.5-202ENST00000641632 1098 ntBASIC16.55■□□□□ 0.24
RNF40O75150 AC009090.5-201ENST00000624886 2285 ntBASIC16.55■□□□□ 0.24
RNF40O75150 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF40O75150 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
RNF40O75150 AC107918.4-201ENST00000641966 3141 ntBASIC16.55■□□□□ 0.24
RNF40O75150 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF40O75150 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF40O75150 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms