Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 CICP20-201ENST00000443330 2801 ntBASIC14.97□□□□□ -0.01
ITM2AO43736 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 AL080243.2-201ENST00000418783 582 ntBASIC14.97□□□□□ -0.01
ITM2AO43736 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
ITM2AO43736 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.97□□□□□ -0.01
ITM2AO43736 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.97□□□□□ -0.01
ITM2AO43736 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.97□□□□□ -0.01
ITM2AO43736 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.97□□□□□ -0.01
ITM2AO43736 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.97□□□□□ -0.01
ITM2AO43736 AL513210.1-201ENST00000629608 234 ntBASIC14.97□□□□□ -0.01
ITM2AO43736 AC055811.4-201ENST00000624039 1754 ntBASIC14.97□□□□□ -0.01
ITM2AO43736 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 AC011474.4-201ENST00000623523 2076 ntBASIC14.97□□□□□ -0.01
ITM2AO43736 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.97□□□□□ -0.01
ITM2AO43736 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ITM2AO43736 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
ITM2AO43736 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ITM2AO43736 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 AL354702.1-201ENST00000442006 1960 ntBASIC14.96□□□□□ -0.01
ITM2AO43736 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
ITM2AO43736 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.96□□□□□ -0.01
ITM2AO43736 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.96□□□□□ -0.01
ITM2AO43736 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
ITM2AO43736 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.96□□□□□ -0.01
ITM2AO43736 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.96□□□□□ -0.01
ITM2AO43736 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.96□□□□□ -0.01
ITM2AO43736 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 TPT1P11-201ENST00000458482 498 ntBASIC14.96□□□□□ -0.01
ITM2AO43736 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.96□□□□□ -0.01
ITM2AO43736 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.96□□□□□ -0.01
ITM2AO43736 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.96□□□□□ -0.01
ITM2AO43736 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.96□□□□□ -0.01
ITM2AO43736 AL033527.5-202ENST00000641632 1098 ntBASIC14.96□□□□□ -0.01
ITM2AO43736 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ITM2AO43736 MST1P2-201ENST00000457982 2291 ntBASIC14.96□□□□□ -0.01
ITM2AO43736 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.96□□□□□ -0.01
ITM2AO43736 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
ITM2AO43736 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
ITM2AO43736 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
ITM2AO43736 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
ITM2AO43736 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
ITM2AO43736 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.95□□□□□ -0.02
ITM2AO43736 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.95□□□□□ -0.02
ITM2AO43736 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
ITM2AO43736 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms