Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 GNAQP1-201ENST00000444815 1067 ntBASIC17.09■□□□□ 0.33
ACTN4O43707 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.09■□□□□ 0.33
ACTN4O43707 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.09■□□□□ 0.33
ACTN4O43707 TPRX2P-201ENST00000535362 881 ntBASIC17.09■□□□□ 0.33
ACTN4O43707 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ACTN4O43707 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.09■□□□□ 0.33
ACTN4O43707 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ACTN4O43707 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ACTN4O43707 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.09■□□□□ 0.33
ACTN4O43707 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.09■□□□□ 0.33
ACTN4O43707 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ACTN4O43707 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ACTN4O43707 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.08■□□□□ 0.33
ACTN4O43707 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ACTN4O43707 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ACTN4O43707 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
ACTN4O43707 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
ACTN4O43707 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.08■□□□□ 0.32
ACTN4O43707 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ACTN4O43707 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.08■□□□□ 0.32
ACTN4O43707 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ACTN4O43707 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ACTN4O43707 SPDYE19P-201ENST00000338590 713 ntBASIC17.08■□□□□ 0.32
ACTN4O43707 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.08■□□□□ 0.32
ACTN4O43707 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ACTN4O43707 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.08■□□□□ 0.32
ACTN4O43707 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ACTN4O43707 RFPL4AP1-201ENST00000530883 850 ntBASIC17.08■□□□□ 0.32
ACTN4O43707 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.08■□□□□ 0.32
ACTN4O43707 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.08■□□□□ 0.32
ACTN4O43707 AKR1B10P2-201ENST00000577332 927 ntBASIC17.08■□□□□ 0.32
ACTN4O43707 BRI3BPP1-201ENST00000594224 787 ntBASIC17.08■□□□□ 0.32
ACTN4O43707 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.08■□□□□ 0.32
ACTN4O43707 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.08■□□□□ 0.32
ACTN4O43707 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ACTN4O43707 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.08■□□□□ 0.32
ACTN4O43707 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ACTN4O43707 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
ACTN4O43707 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ACTN4O43707 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
ACTN4O43707 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.07■□□□□ 0.32
ACTN4O43707 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.07■□□□□ 0.32
ACTN4O43707 AC093214.1-201ENST00000511688 1107 ntBASIC17.07■□□□□ 0.32
ACTN4O43707 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.07■□□□□ 0.32
ACTN4O43707 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.07■□□□□ 0.32
ACTN4O43707 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.07■□□□□ 0.32
ACTN4O43707 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.07■□□□□ 0.32
ACTN4O43707 MIR8072-201ENST00000614241 80 ntBASIC17.07■□□□□ 0.32
ACTN4O43707 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC17.07■□□□□ 0.32
ACTN4O43707 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ACTN4O43707 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms