Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.21■□□□□ 0.03
LDB2O43679 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LDB2O43679 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.21■□□□□ 0.03
LDB2O43679 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.21■□□□□ 0.03
LDB2O43679 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.21■□□□□ 0.03
LDB2O43679 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 AP005018.1-201ENST00000525475 301 ntBASIC15.21■□□□□ 0.03
LDB2O43679 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.21■□□□□ 0.03
LDB2O43679 AP001063.1-201ENST00000568332 529 ntBASIC15.21■□□□□ 0.03
LDB2O43679 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.21■□□□□ 0.03
LDB2O43679 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.21■□□□□ 0.03
LDB2O43679 RPSAP52-203ENST00000622976 1023 ntBASIC15.21■□□□□ 0.03
LDB2O43679 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LDB2O43679 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.21■□□□□ 0.03
LDB2O43679 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LDB2O43679 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LDB2O43679 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LDB2O43679 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
LDB2O43679 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.21■□□□□ 0.02
LDB2O43679 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.21■□□□□ 0.02
LDB2O43679 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LDB2O43679 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.21■□□□□ 0.02
LDB2O43679 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LDB2O43679 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 AC068587.6-202ENST00000641839 5619 ntBASIC15.2■□□□□ 0.02
LDB2O43679 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LDB2O43679 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 AC093433.1-201ENST00000458048 571 ntBASIC15.2■□□□□ 0.02
LDB2O43679 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.2■□□□□ 0.02
LDB2O43679 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.2■□□□□ 0.02
LDB2O43679 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LDB2O43679 LINC00552-201ENST00000625151 2579 ntBASIC15.2■□□□□ 0.02
LDB2O43679 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LDB2O43679 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LDB2O43679 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
LDB2O43679 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LDB2O43679 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LDB2O43679 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
LDB2O43679 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.19■□□□□ 0.02
LDB2O43679 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LDB2O43679 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LDB2O43679 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LDB2O43679 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LDB2O43679 EIF3FP3-201ENST00000434851 1086 ntBASIC15.19■□□□□ 0.02
LDB2O43679 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.19■□□□□ 0.02
LDB2O43679 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms