Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.33■□□□□ 0.04
SMAD6O43541 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.33■□□□□ 0.04
SMAD6O43541 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMAD6O43541 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.33■□□□□ 0.04
SMAD6O43541 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
SMAD6O43541 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMAD6O43541 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.33■□□□□ 0.04
SMAD6O43541 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.33■□□□□ 0.04
SMAD6O43541 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SMAD6O43541 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.33■□□□□ 0.04
SMAD6O43541 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SMAD6O43541 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.33■□□□□ 0.04
SMAD6O43541 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
SMAD6O43541 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SMAD6O43541 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SMAD6O43541 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.33■□□□□ 0.04
SMAD6O43541 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.33■□□□□ 0.04
SMAD6O43541 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.32■□□□□ 0.04
SMAD6O43541 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SMAD6O43541 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SMAD6O43541 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
SMAD6O43541 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 FAM8A4P-201ENST00000435433 1213 ntBASIC15.32■□□□□ 0.04
SMAD6O43541 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 AL391280.1-201ENST00000506969 1062 ntBASIC15.32■□□□□ 0.04
SMAD6O43541 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SMAD6O43541 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.32■□□□□ 0.04
SMAD6O43541 AC010328.2-201ENST00000597698 1111 ntBASIC15.32■□□□□ 0.04
SMAD6O43541 AC138466.3-201ENST00000619983 221 ntBASIC15.32■□□□□ 0.04
SMAD6O43541 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SMAD6O43541 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.32■□□□□ 0.04
SMAD6O43541 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SMAD6O43541 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SMAD6O43541 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SMAD6O43541 AP002414.2-201ENST00000591780 3365 ntBASIC15.32■□□□□ 0.04
SMAD6O43541 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.31■□□□□ 0.04
SMAD6O43541 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SMAD6O43541 AC023090.2-201ENST00000625182 2110 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.31■□□□□ 0.04
SMAD6O43541 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 RPL13AP20-201ENST00000459725 609 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 MESTP3-201ENST00000503460 968 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SMAD6O43541 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.31■□□□□ 0.04
SMAD6O43541 C2orf69P2-201ENST00000562032 1123 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.31■□□□□ 0.04
SMAD6O43541 MIR4741-201ENST00000579822 90 ntBASIC15.31■□□□□ 0.04
SMAD6O43541 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.31■□□□□ 0.04
SMAD6O43541 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SMAD6O43541 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.31■□□□□ 0.04
SMAD6O43541 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms