Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.51□□□□□ -0.57
SOCS3O14543 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SOCS3O14543 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.51□□□□□ -0.57
SOCS3O14543 AL353779.1-201ENST00000434793 351 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 AL512638.1-201ENST00000457493 794 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 RN7SL399P-201ENST00000471648 279 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 AC093214.1-201ENST00000511688 1107 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.51□□□□□ -0.57
SOCS3O14543 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.51□□□□□ -0.57
SOCS3O14543 TPRX2P-201ENST00000535362 881 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.51□□□□□ -0.57
SOCS3O14543 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.51□□□□□ -0.57
SOCS3O14543 RRP7BP-205ENST00000566851 833 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.51□□□□□ -0.57
SOCS3O14543 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 AL049840.4-201ENST00000602422 811 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 AC107373.2-201ENST00000607735 490 ntBASIC11.51□□□□□ -0.57
SOCS3O14543 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 KCP-203ENST00000610776 5108 ntTSL 5 BASIC11.51□□□□□ -0.57
SOCS3O14543 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SOCS3O14543 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.51□□□□□ -0.57
SOCS3O14543 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SOCS3O14543 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 AC092183.1-201ENST00000469884 875 ntBASIC11.5□□□□□ -0.57
SOCS3O14543 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.5□□□□□ -0.57
SOCS3O14543 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.5□□□□□ -0.57
SOCS3O14543 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.5□□□□□ -0.57
SOCS3O14543 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.5□□□□□ -0.57
SOCS3O14543 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms