Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.89□□□□□ -0.03
E2F3O00716 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 ATP5G2P4-201ENST00000442175 420 ntBASIC14.89□□□□□ -0.03
E2F3O00716 AC004066.1-201ENST00000502488 802 ntBASIC14.89□□□□□ -0.03
E2F3O00716 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.89□□□□□ -0.03
E2F3O00716 API5-211ENST00000534695 560 ntTSL 5 BASIC14.89□□□□□ -0.03
E2F3O00716 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.89□□□□□ -0.03
E2F3O00716 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.89□□□□□ -0.03
E2F3O00716 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.89□□□□□ -0.03
E2F3O00716 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.89□□□□□ -0.03
E2F3O00716 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.89□□□□□ -0.03
E2F3O00716 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.89□□□□□ -0.03
E2F3O00716 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.89□□□□□ -0.03
E2F3O00716 AC004790.1-201ENST00000612686 536 ntBASIC14.89□□□□□ -0.03
E2F3O00716 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.89□□□□□ -0.03
E2F3O00716 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.89□□□□□ -0.03
E2F3O00716 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
E2F3O00716 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 AL360270.3-201ENST00000609118 1348 ntBASIC14.89□□□□□ -0.03
E2F3O00716 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
E2F3O00716 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
E2F3O00716 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
E2F3O00716 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 AL157414.3-201ENST00000624276 1954 ntBASIC14.88□□□□□ -0.03
E2F3O00716 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.88□□□□□ -0.03
E2F3O00716 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.88□□□□□ -0.03
E2F3O00716 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 AC140912.1-201ENST00000577171 1054 ntBASIC14.88□□□□□ -0.03
E2F3O00716 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
E2F3O00716 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.88□□□□□ -0.03
E2F3O00716 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.88□□□□□ -0.03
E2F3O00716 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
E2F3O00716 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
E2F3O00716 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
E2F3O00716 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.87□□□□□ -0.03
E2F3O00716 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
E2F3O00716 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms