Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UPK2O00526 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
UPK2O00526 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
UPK2O00526 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.26□□□□□ -0.45
UPK2O00526 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 AC113367.3-201ENST00000508316 1912 ntBASIC12.25□□□□□ -0.45
UPK2O00526 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK2O00526 TREML5P-201ENST00000421694 576 ntBASIC12.25□□□□□ -0.45
UPK2O00526 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK2O00526 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK2O00526 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK2O00526 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK2O00526 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.25□□□□□ -0.45
UPK2O00526 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.25□□□□□ -0.45
UPK2O00526 AL158212.4-201ENST00000624062 1286 ntBASIC12.25□□□□□ -0.45
UPK2O00526 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 BTBD7P1-201ENST00000447253 1453 ntBASIC12.25□□□□□ -0.45
UPK2O00526 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 GRK6P1-201ENST00000400595 1711 ntBASIC12.25□□□□□ -0.45
UPK2O00526 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
UPK2O00526 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.25□□□□□ -0.45
UPK2O00526 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.25□□□□□ -0.45
UPK2O00526 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
UPK2O00526 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
UPK2O00526 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
UPK2O00526 MIR1233-2-201ENST00000408138 82 ntBASIC12.24□□□□□ -0.45
UPK2O00526 MIR1233-1-201ENST00000408722 82 ntBASIC12.24□□□□□ -0.45
UPK2O00526 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
UPK2O00526 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms